Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913428.1_cds_XP_016463487.1_56611
CDS Infomation

[gene=LOC107786512] [db_xref=GeneID:107786512] [protein=terpene synthase 10-like] [protein_id=XP_016463487.1] [location=complement(join(39381..39680,39878..40126,40230..40368,40467..40685,40769..41126,41722..41980,42084..42263))] [gbkey=CDS]
Sequence

ATGGCAATGGCGACAATCATCTCTGCATCAATTATTAGCAAACCATTTTTAATTTGGACA
TTACAGGTTCCAAAATCCTGCATTTCTAATGCTCAAGCTGCCCCTCTTAGACGATCTGGA
AATTATCAGCCTTCTATTTGGGAGTATACTCAAATTCAATCATTGAAGAATCAATATTCA
GGAGAGAAATTCATCAGACGACGCGATGAGCTGAAGATGGAAGTCAAGATTATGCTTAGT
GATCGTAACATGAAGCCATTGGACCAGTTAGAGATTATCGATCTTTTGCAAAGACTTGGA
TTATCCTATAACTTTGAGGATGAAATATACAGCATTCTGAATTACGTATGTGACAAAAGT
AGCAAAAGCAACGGAGATTTGTATGCTAAAGCCCTTTCACTTAGGCTCTTGAGACAACAC
GGATTTAACGTTTCACAAGAAATATTTGATGGTCTTAGTGAAACTCACACTGAGGATACG
AAGGGGATGCAATATTTGTATGAAGCTTCTTTTCTTGCAACAGAAGGTGAGAGTGAATTG
GAGCAAGCAAGAAATTGGAGTGAAAAACAACTAAGAGAATATTTGGAAAATAAAAATATT
GACCAAAATGTGGCTGAATTAGTGCACCATGCTTTGGAACTTCCATTGCATTGGAAGATG
TTGAGATTAGAGGCAAGGTGGTTCATCAATTTTTACAAGAAAAGACAAGACATGATTCCT
TTATTGCTTGAGCTGGCTATCCTTGACTTCAACGTTGTTCAAGCAGCTCATATTGAAGAC
CTAAAATATGTGGCAAGGTGGTGGAAAGAAACAGGCTTAGCAGAGAATCTGCCATTTGCT
AGGGATAGATTAGTGGAGAATTTCTTTTGGACAATCGGAGTAAATTTCCTTCCTAAATAT
GGATACTTCAGAAGAATTGCCACAAAGGTAAATGCTTTAGTAACCACAATAGACGATGTA
TATGATGTTTTTGGTACTTTGGATGAACTACAATGCTTCACTGATGCCATTCAAAGATGG
AATATCGACGAGTTGGATAACCTCCCAGACAATATGAAGTTGTGTTATTTTACACTTGAC
AACTTTATTAATGAAGTGGCTTGTGATGCTTTTGAAGAGCAACGCATTCTCATTGTACCC
TATCTAAGAAATGCGTGGAGAGATTTGTGCAAATCCTACTTAAGAGAAGCAAAGTGGTAC
TTTAGCCAGTATATCCCAACCATGGAAGAATACATGGACAATGCCTGGATTTCGATATCA
GCTCCAGTAATATTAGTACATGCCTATTTCCTCATTGCTAACCCTGTAAACAAGGAGGAT
TTGCATTACTTAAAGAATTACCATGACATAATTCGTTGGTCAGCCTTGATTTTGCGGCTC
GCGAATGATTTAGGAACATCATCGGAAGAGTTGAAAAGGGGTGATGTACCCAAATCAATA
CAATGTTACATGAACGAAAAAAAAGTTTCTGAAGAAGATGCTCGACAACATATTAGGCTT
TTGATTAGTGAGACGTGGAAGAAATTGAACGAAGCTCATAATGTAGCAGCACACCCCTTC
CCTAAGATGTTTATTTGGAGTGCTATGAACCTAGCAAGAATGGCACAATGCATGTATCAA
CATGGTGATGGACATGGCGGCCATAATTCTGAGACAAAAAATCACATCATGGCATTGCTC
TTTGAATCTATTCCTCCAGCTTGA

Peptide Sequence

PEP ID

XP_016463487.1
PEP Infomation

PREDICTED: terpene synthase 10-like [Nicotiana tabacum]
Sequence

MAMATIISASIISKPFLIWTLQVPKSCISNAQAAPLRRSGNYQPSIWEYTQIQSLKNQYS
GEKFIRRRDELKMEVKIMLSDRNMKPLDQLEIIDLLQRLGLSYNFEDEIYSILNYVCDKS
SKSNGDLYAKALSLRLLRQHGFNVSQEIFDGLSETHTEDTKGMQYLYEASFLATEGESEL
EQARNWSEKQLREYLENKNIDQNVAELVHHALELPLHWKMLRLEARWFINFYKKRQDMIP
LLLELAILDFNVVQAAHIEDLKYVARWWKETGLAENLPFARDRLVENFFWTIGVNFLPKY
GYFRRIATKVNALVTTIDDVYDVFGTLDELQCFTDAIQRWNIDELDNLPDNMKLCYFTLD
NFINEVACDAFEEQRILIVPYLRNAWRDLCKSYLREAKWYFSQYIPTMEEYMDNAWISIS
APVILVHAYFLIANPVNKEDLHYLKNYHDIIRWSALILRLANDLGTSSEELKRGDVPKSI
QCYMNEKKVSEEDARQHIRLLISETWKKLNEAHNVAAHPFPKMFIWSAMNLARMAQCMYQ
HGDGHGGHNSETKNHIMALLFESIPPA

Transcript Sequence

Gene sequence data has not been registered.